PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma9g00010.1
Common NameZOSMA_9G00010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bHLH
Protein Properties Length: 305aa    MW: 32799.7 Da    PI: 6.7641
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma9g00010.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.10.000351812191255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  Zosma9g00010.1 181 RKEKLGDRITSLHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 219
                     6678889999999999998.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.633169218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.58E-5179223No hitNo description
SuperFamilySSF474594.06E-10179230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.4E-7183226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MMGSGGWWNL KHQSEQQQQQ QISPVLPSSS STSSPSFSSF PQYPLPSVPW HDTQDLPESW  60
SQLLLGGLVD EDMRCSSYTP FQTHANGSSS SSMVDVKQER IETGSPWNQI LPVSVSSSPR  120
SSCITNIMDF ATTTTTTAKL DGHPKPDVSS ECNSTSSGSA LKKARRAQGG GSSAQSCFKV  180
RKEKLGDRIT SLHQLVSPFG KTDTASVLLE AIGYIRFLQS QIETLSSPYM GGSGQGEGSC  240
IFPEDPGQLL NDACLKRRGA IIDQKKTDLK SKGLCLVPIS CTMHVDNDNG ADYWTPPGLG  300
VAFR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008783244.11e-104PREDICTED: transcription factor bHLH68-like
SwissprotQ8S3D11e-63BH068_ARATH; Transcription factor bHLH68
TrEMBLA0A0K9NGJ90.0A0A0K9NGJ9_Z
STRINGVIT_11s0016g03560.t017e-91(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2167817
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.16e-64bHLH family protein